Diagnosis of diseases associated with the immune system by determining cytosine methylation

A nucleic acid comprising an at a least 18 bases-long sequence segment of the chemically pretreated DNA of genes associated with the immune system according to one of the sequences of the genes A1BG (T80683), C4A (K02403), C4BPAL2 (X81360), CD1A (M27735), CD20 (L23418), CDR2 (M63256), CENPB (X05299), COL11A2 (U32169), CR1L (M31230), CYP2A (X06401), EBF (AA504812), ERCC2 (L47234), ESD (M13450), ETV4 (D12765), FCGR2C (M90737), FLG (M24355), FN1 (M10905), ITGA1 (X68742), ITGAD (U40274), KRT4 (X07695), KSR (U43586), LY9 (L42621), MEKK1 (U29671), MFAP4 (L38486), MMP18 (Y08622), MYCL1 (M19720), NOTCH1 (M73980), PDE7A (L12052), PIK3R1 (M61906), SLC9A1 (M81768), TCF3 (M31222), TCRA (M12959), TCRB (K02779), TCRG (M27331), TLR5 (U08888), TNFSF11 (AF013171), UBC (AB009010), ZNF121 (M99593), ZRK (L08961), ALPPL2 (NM—031313), AHSG (NM—001622), FCGR3A (NM—000569), FUT3 (NM—000149), IL1R2 (NM—004633), IL2RB (NM—000878), LHB (NM—000894), MDH2 (NM—005918), SLC11A2 (NM—000617), OMG (NM—002544), PIK3CA (NM—006218), TPM1 (NM—000366), TUB (NM—003320), ABAT (NM 000663), ACADL (NM—001608), ACO1 (NM—002197), ADAM10 (NM—001110), ADD1 (NM—014189), ADH4 (NM—000670), ADRA2C (NM—000683), AGA (NM—000027), AGTR2 (NM—000686), AKT1 (NM—005163), ALDH6 (NM—000693), AMPH (NM—001635), ANXA4 (NM—001153), APBA2 (NM—005503), APC (NM—000038), APOA2 (NM—001643), ARHGAP1 (NM—004308), ATOX1 (NM—004045), ATP2B2 (NM—001683), ATP4B (NM—000705), ATR (NM—001184), AUH (NM—001698), AXL (NM—001699), BCL2 (NM—000633), BENE (NM—005434), BID (NM—001196), BMI1 (NM—005180), BN51T (NM—001722), BUB1 (NM—004336), C1R (NM—001733), C4BPB (NM—000716), C5R1 (NM—001736), CASP3 (NM—004346), CASP7 (NM—001227), CBFB (NM—001755), CCR4 (NM—005508), CD151 (NM—004357), CD36L1 (NM—005505), CD4 (NM—000616), CD81 (NM—004356), CDH12 (NM—004061), CDW52 (NM—001803), CEL (NM—001807), CES1 (NM—001266), CGA (NM—000735), CHS1 (NM—000081), CLDN3 (NM—001306), CNK (NM—004073), CSF2RA (NM—006140), CTSK (NM—000396), CX3CR1 (NM—001337), CYBB (NM—000397), CYP11A (NM—000781), DCC (NM—005215), DFFB (NM—004402), DOCK1 (NM—001380), DPYD (NM—000110), ELAVL2 (NM—004432), ELAVL4 (NM—021952), EPB41 (NM—004437), EPHA3 (NM—005233), EPHX2 (NM—001979), EPS15 (NM—001981), ETV6 (NM—001987), F2 (NM—000506), F8A (NM—012151), FABP6 (NM—001445), FADD (NM—003824), FANCE (NM—021922), FCAR (NM—002000), FGA (NM—021871), FGB (NM—005141), FGFR3 (NM—000142), FGG (NM—000509), HFL3 (NM—005666), FOXO1A (NM—002015), ADAM2 (NM—001464), FUCA1 (NM—000147), FUT2 (NM—000511), FY (NM—002036), GABRA5 (NM—000810), GABRA6 (NM—000811), GAS (NM—000805), GAS6 (NM—000820), GBA (NM—000157), GFI1 (NM—005263), GH2 (NM—002059), GHR (NM—000163), GIF (NM—005142), GNAQ (NM—002072), GP9 (NM—000174), GPR15 (NM—005290), GPR30 (NM—001505), GRB14 (NM—004490), GRIK1 (NM—000830), GUCY2D (NM—000180), HADHA (NM—000182), NRG1 (NM—013964), HIVEP1 (NM—002114), HLALS (NM—001531), HLCS (NM—000411), HMX1 (NM—018942), HNRPD (NM—002138), HSA277165 (NM—018411), HRG (NM—000412), HSPG2 (NM—005529), HTN3 (NM—000200), HTR2A (NM—000621), HTR7 (NM—000872), IFNA1 (NM—024013), IL10RA (NM—001558), IL1A (NM—000575), IL1B (NM—000576), IL1R1 (NM—000877), IL3RA (NM—002183), IL9 (NM—000590), ILF1 (NM—004514), ILF2 (NM—004515), SCYB10 (NM—001565), INPP5D (NM—005541), ITGAX (NM—000887), ITGB1 (NM—002211), ITGB3 (NM—000212), ITGB5 (NM—002213), ITGB7 (NM—000889), ITK (NM—005546), KCNJ3 (NM—002239), KPNA1 (NM—002264), LECT2 (NM—002302), LEPR (NM—002303), LPA (NM—005577), KCNH2 (NM—000238), LSP1 (NM—002339), LTF (NM—002343), MAB21L1 (NM—005584), MAL (NM—002371), MASP1 (NM—001879), MCF2 (NM—005369), MAP3K3 (NM—002401), MMP16 (NM—022564), MMP17 (NM—016155), MMP23A (NM—004659), MMP7 (NM—002423), MYC (NM—002467), NAGA (NM—000262), NAT2 (NM—000015), NDUFS2 (NM—004550), NEB (NM—004543), NEU1 (NM—000434), NFATC4 (NM—004554), NFE2L2 (NM—006164), NFRKB (NM—006165), NGFB (NM—002506), NTF3 (NM—002527), NUMA1 (NM—006185), TNRC11 (NM—005120), SLC22A1L (NM—002555), DUSP2 (NM—004418), PAFAH2 (NM—000437), PAPPA (NM—002581), PCM1 (NM—006197), PCTK1 (NM—006201), PDE4A (NM—006202), PDE4B (NM—002600), PEX10 (NM—002617), SERPINB9 (NM—004155), PIGA (NM—002641), PLAGL1 (NM—002656), POU2AF1 (NM—006235), PRKG1 (NM—006258), MAPK10 (NM—002753), MAPK9 (NM—002752), PROP1 (NM—006261), PSD (NM—002779), PTK2B (NM—004103), PTN (NM—002825), PTPN13 (NM—006264), PTPN6 (NM—002831), PTPRD (NM—002839), PTPRG (NM—002841), QDPR (NM—000320), RAC3 (NM—005052), RELA (NM—021975), REQ (NM—006268), RMSA1 (NM—002932), RSN (NM—002956), S100A7 (NM—002963), S100A8 (NM—002964), IQGAP1 (NM—003870), SCN1B (NM—001037), SCN5A (NM—000335), SCNN1G (NM—001039), SCYA14 (NM—004166), SCYA7 (NM—006273), SDHC (NM—003001), SELPLG (NM—003006), SFTPA2 (NM—006926), SGSH (NM—000199), SHMT2 (NM—005412), MYH11 (NM—002474), SNRPN (NM—003097), SOAT1 (NM—003101), SORL1 (NM—003105), SPP1 (NM—000582), SSTR1 (NM—001049), STATI2 (NM—003877), STX1B (NM—003163), TCF8 (NM—030751), TCP1 (NM—030752), TF (NM—001063), TGFBI (NM—000358), TGFBR3 (NM—003243), TGM2 (NM—004613), TLR1 (NM—003263), TM4SF7 (NM—003271), TNFAIP6 (NM—007115), TNFRSF1A (NM—001065), TNFSF12 (NM—003809), TPH (NM—004179), TPI1 (NM—000365), TRAF2 (NM—021138), TRAF5 (NM—004619), TSTA3 (NM—003313), TTR (NM—000371), UBE1 (NM—003334), UBE2V2 (NM—003350), UMPK (NM—012474), UP (NM—003364), UPK1B (NM—006952), USP7 (NM—003470), VASP (NM—003370), VDR (NM—000376), NSEP1 (NM—004559), ZFP161 (NM—003409), AQP1 (NM—000385), BDKRB1 (NM—000710), F13A1 (NM—000129), and complementary sequences thereof.