KdtB
OwnerJohn P. Throup, Stephanie Van Horn +5inventors
InventorsJohn P. Throup, Stephanie Van Horn, Richard L. Warren, David J. Holmes, Alison F. Chalker, Chi Young So, Karen A. Ingraham
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Abstract
The invention provides kdtB polypeptides and polynucleotides encoding kdtB polypeptides and methods for producing such polypeptides by recombinant techniques. Also provided are methods for utilizing kdtB polypeptides to screen for antibacterial compounds.
Claims10
An isolated polypeptide selected from the group consisting of:
- (i) an isolated polypeptide comprising an amino acid having at least 95% identity to the amino acid sequence of SEQ ID NO:
- 2 over the entire length of SEQ ID NO:
- 2;
- (ii) an isolated polypeptide comprising the amino acid sequence of SEQ ID NO:
- 2,
- (iii) an isolated polypeptide that is the amino acid sequence of SEQ ID NO:
- 2, and
- (iv) a polypeptide that is encoded by a recombinant polynucleotide comprising the polyncleotide sequence of SEQ ID NO:
- 1.
An isolated polynucleotide selected from the group consisting of:
- (i) an isolated polynucleotide comprising a polynucleotide sequence encoding a polypeptide that has at least 95% identity to the amino acid sequence of SEQ ID NO:
- 2, over the entire length of SEQ ID NO:
- 2;
- (ii) an isolated polynucleotide comprising a polynucleotide sequence that has at least 95% identity
- over its entire length to a polynucleotide sequence encoding the polypeptide of SEQ ID NO:
- 2;
- (iii) an isolated polynucleotide comprising a nucleotide sequence that has at least 95% identity
- to that of SEQ ID NO:
- 1 over the entire length of SEQ ID NO:
- 1;
- (iv) an isolated polynucleotide comprising a nucleotide sequence encoding the polypeptide of SEQ ID NO:
- 2;
- (v) an isolated polynucleotide that is the polynucleotide of SEQ ID NO:
- 1;
- (vi) an isolated polynucleotide of at least 30 nucleotides in length obtainable by screening an appropriate library under stringent hybridization conditions with a probe having the sequence of SEQ ID NO:
- 1 or a fragment thereof of of at least 30 nucleotides in length;
- (vii) an isolated polynucleotide encoding a mature polypeptide expressed by the kdtB gene comprised in the Streptococcus pneumoniae;
- and
- (viii) a polynucleotide sequence complementary to said isolated polynucleotide of (i), (ii), (iii), (iv), (v), (vi) or (vii).
A process for producing a polypeptide selected from the group consisting of:
- (i) an isolated polypeptide comprising an amino acid sequence selected from the group having at least 95% identity
- to the amino acid sequence of SEQ ID NO:
- 2 over the entire length of SEQ ID NO:
- 2;
- (ii) an isolated polypeptide comprising the amino acid sequence of SEQ ID NO:
- 2;
- (iii) an isolated polypeptide that is the amino acid sequence of SEQ ID NO:
- 2, and
- (iv) a polypeptide that is encoded by a recombinant polynucleotide comprising the polynucleotide sequence of SEQ ID NO:
- 1,
- comprising the step of culturing a host cell under conditions sufficient for the production of the polypeptide.
A process for producing a host cell comprising an expression system or a membrane thereof expressing a polypeptide selected from the group consisting of:
- (i) an isolated polypeptide comprising an amino acid sequence selected from the group having at least 95% identity
- to the amino acid sequence of SEQ ID NO:
- 2 over the entire length of SEQ ID NO:
- 2;
- (ii) an isolated polypeptide comprising the amino acid sequence of SEQ ID NO:
- 2;
- (iii) an isolated polypeptide that is the amino acid sequence of SEQ ID NO:
- 2, and
- (iv) a polypeptide that is encoded by a recombinant polynucleotide comprising the polynucleotide sequence of SEQ ID NO:
- 1,
- said process comprising the step of transforming or transfecting a cell with an expression system comprising a polynucleotide capable of producing said polypeptide of (i), (ii), (iii) or (iv) when said expression system is present in a compatible host cell such the host cell, under appropriate culture conditions, produces said polypeptide of (i), (ii), (iii) or (iv).
A host cell or a membrane expressing a polypeptide selected from the group consisting of:
- (i) an isolated polypeptide comprising an amino acid sequence selected from the group having at least 95% identity to the amino acid sequence of SEQ ID NO:
- 2 over the entire length of SEQ ID NO:
- 2;
- (ii) an isolated polypeptide comprising the amino acid sequence of SEQ ID NO:
- 2;
- (iii) an isolated polypeptide that is the amino acid sequence of SEQ ID NO:
- 2, and
- (iv) a polypeptide that is encoded by a recombinant polynucleotide comprising the polynucleotide sequence of SEQ ID NO:
- 1.
Dependencies are inferred from the claim text.