Compositions and methods for DNA cytosine carboxymethylation
AssigneeThe Trustees of the University of Pennsylvania
InventorsRahul Kohli, Tong Wang, Emily Schutsky
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Abstract
Compositions and methods for carboxymethylation of cytosine containing DNA and applications thereof for direct sequencing of 5mC are disclosed.
Claims22
An isolated genetically modified methyltransferase enzyme having carboxymethyltransferase activity, which catalyzes formation of 5-carboxymethylcytosine employing carboxy-S-adenosyl-L-methionine (CxSAM) as a substrate, said enzyme having an active site motif naturally comprising a polar amino acid residue that is situated adjacent to carbon 5 of a target cytosine present in a nucleic acid of interest, wherein said polar amino acid is substituted with a positively charged amino acid, wherein said enzyme comprises an amino acid sequence having at least 90% sequence identity to SEQ ID NO:
- 1, and wherein position N374 of SEQ ID NO:
- 1 can be either K or R.
Dependencies are inferred from the claim text.