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US 12,649,699 B2Granted
Phosphate sensing microbial gene switch
AssigneeSwitch Bioworks, Inc.
InventorsCaroline Kukolj, Tim Schnabel, Timothy Lyndon Haskett, Gregory Alexander Knauf, Tomasz Zajkowski, Elizabeth Leigh Ordeman, Niklaus Hoyt Evitt, James Pearce, Sandipan Samaddar, Daniel Torres Naylor, Hsiao-Han Lin, Alexis Makena Chun
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Abstract
Genetically engineered bacteria which express RNAs or proteins that produce ammonia upon decreases in phosphate concentrations are disclosed.
Claims16
A genetically engineered bacterium comprising:
- (i) a first gene expression cassette comprising a recombinant DNA molecule comprising a phosphate-sensitive promoter of a bacterial pstS phosphate ABC transporter gene operably linked to DNA encoding a transcript comprising a ribosome binding site (RBS) operably linked to a transcriptional repressor protein coding region,
- wherein the phosphate-sensitive promoter comprises a sequence having at least 95% sequence identity to SEQ ID NO:
- 515 and comprising the sequences of SEQ ID NO:
- 525, 526, 527, 528, and 529, wherein the RBS comprises SEQ ID NO:
- 449, and wherein the transcriptional repressor protein coding region encodes a bacterial TetR repressor protein;
- and
- (ii) a second gene expression cassette comprising a recombinant DNA molecule comprising a promoter which is repressed by the transcriptional repressor protein and which is operably linked to a DNA sequence encoding a bacterial glutamine synthetase
- wherein the promoter in the second gene expression cassette comprises a Ptet promoter;
- wherein the genetically engineered bacterium is of the genus Kosakonia and releases a greater amount of ammonia when grown in liquid culture under microaerobic conditions when inoculated in the presence of 0 mM inorganic phosphate than when grown in liquid culture under microaerobic conditions when inoculated in the presence of 20 mM inorganic phosphate.
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