Oxidative breakdown of polysaccharides
AssigneesDanmarks Tekniske Universitet, Institut National de Recherche Pour L'Agriculture, L'Alimentation et L'Environment
InventorsMaher Abou Hachem, Majid Haddad Momeni, Jean-Guy Berrin
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Abstract
The present invention concerns oxidative degradation of polysaccharides, and provides a composition, kit, and method for increasing the efficiency of recalcitrant cellulose degradation, using an auxiliary activity family 7 (AA7) enzymes and a polysaccharide monooxygenase enzyme (E.C. 1.14.99.-). Said AA7 enzyme comprises dehydrogenase activity (E.C. 1.1.1.-) and gluco-oligosaccharide oxidase activity (E.C. 1.1.3.-) and provides a novel “functionality” within a previously not described Glade of AA7 dehydrogenases.
Claims11
A method for oxidizing a polysaccharide comprising the steps:
- (a) providing a polysaccharide, and
- (b) incubating said polysaccharide with a composition comprising a lytic polysaccharide monooxygenase enzyme (E.C. 1.14.99.-) and an auxiliary activity family 7 (AA7) enzyme,
- wherein said AA7 enzyme comprises (I) dehydrogenase activity (E.C. 1.1.1.-) and (II) gluco-oligosaccharide oxidase activity (E.C. 1.1.3.-) for oxidizing reducing end glycosyl residues of monosaccharides, oligosaccharides, and/or polysaccharides, and wherein the amino acid sequence of said AA7 enzyme in pairwise alignment with polypeptide SEQ ID NO.:
- 1, comprises
- (i) a catalytic base tyrosine (Y) at a first amino acid position corresponding to amino acid residue Y454 of SEQ ID NO.:
- 1,
- (ii) an arginine (R) at a second amino acid position corresponding to amino acid residue R156 of SEQ ID NO.:
- 1,
- (iii) an amino acid residue other than histidine (H) at a third amino acid position corresponding to amino acid residue S165 of SEQ ID NO.:
- 1, and
- (iv) an amino acid residue other than cysteine (C) at a fourth amino acid position corresponding to amino acid residue G157 of SEQ ID NO.:
- 1 or an amino acid residue other than histidine (H) at a fifth amino acid position corresponding to amino acid residue H97 of SEQ ID NO.:
- 1,
- wherein said pairwise sequence alignment is performed using scoring matrix:
- blosum62, gap opening penalty:
- 1.53, and gap extension penalty 0.123, and wherein the amino acid sequence of said AA7 furthermore has at least 78% sequence identity to SEQ ID NO.:
- 1.
Dependencies are inferred from the claim text.