Imidazopyrazine derivatives, process for preparation thereof, and their uses as luciferins
AssigneesInstitut Pasteur, Centre National De La Recherche Scientifique
InventorsYves-Louis Janin, Eloi Paul Coutant, Vincent Hervin, Glwadys Gagnot, Yves Jacob, Sophie Goyard, Thierry Rose
Life of this patent
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Abstract
The present invention is in the field of bioluminescence in biology and/or medicine. In particular, the invention provides imidazopyrazine derivatives, processes for preparation thereof, and their uses as luciferins.
Claims11
A method to detect and/or measure an enzymatic activity of a luminogenic protein, comprising:
- (a) contacting a compound of following formula (I) with a solution comprising a strong acid to obtain a deprotected form of the compound of formula (I);
- wherein:
- R1 represents H or a group selected from C1-C6 alkyl, C3-C7 cycloalkyl, C6-C10 aryl, aralkyl and C5-C10-membered heteroaryl groups, said C1-C6 alkyl, C3-C7 cycloalkyl, C6-C10 aryl, aralkyl and C5-C10-membered heteroaryl groups optionally substituted by at least one Y1 group;
- R2 represents a group selected from C6-C10 aryl and C5-C10-membered heteroaryl groups, said C6-C10 aryl and C5-C10-membered heteroaryl groups optionally substituted by at least one Y2 group;
- or R1 and R2 together form with the two carbon atoms to which they are respectively attached a C5-C7 cycloalkene group, a C4-C7 heterocycloalkene group, or a C6-C10 arene, said C5-C7 cycloalkene group and C4-C7 heterocycloalkene groups fused with a C6-C10 arene, said C5-C7 cycloalkene group, C4-C7 heterocycloalkene, C6-C10 arene, C5-C7 cycloalkene group and C4-C7 heterocycloalkene groups optionally substituted by at least one Y12 group;
- R3 represents a C1-C6 alkyl, an aralkyl group, a hetaralkyl group or a heterocycloalkyl-CH2— group, said C1-C6 alkyl, aralkyl group, hetaralkyl group and heterocycloalkyl-CH2— group being optionally substituted by at least one Y3 group;
- R4 represents H or a group selected from C1-C6 alkyl and C3-C7 cycloalkyl groups, said C1-C6 alkyl and C3-C7 cycloalkyl groups optionally substituted by at least one Y4 group;
- R5 represents a —C(═O)Ra group or a —C(═O)ORa group;
- wherein when R5 is the —C(═O)Ra group:
- Ra represents H, a C1-C6 alkyl group, a C3-C7 cycloalkyl group, a C6-C10 aryl, or an aralkyl group, said C1-C6 alkyl group, C3-C7 cycloalkyl group, C6-C10 aryl, and aralkyl group optionally substituted by at least one Ya group, selected from a C1-C6 alkyl, a C3-C7 cycloalkyl, a C6-C10 aryl, a C5-C10-membered heteroaryl group, a halogen, a —CF3 group, a —CN group, a —ORi group, a —OSO3H group, a —NRiRii group, and a guanidinyl group;
- and
- wherein when R5 is the —C(═O)ORa group:
- (i) Ra represents H, a C1-C6 alkyl group, a C3-C7 cycloalkyl group optionally substituted by at least one Ya group selected from a C1-C6 alkyl;
- a C3-C7 cycloalkyl;
- a C6-C10 aryl;
- a C5-C10-membered heteroaryl group;
- a halogen;
- a —CF3 group;
- a —CN group;
- a —ORi group;
- a —OSO3H group;
- a —NRiRii group;
- and a guanidinyl group;
- or
- (ii) Ra represents a C6-C10 aryl group optionally substituted by at least one Ya group selected from a C1-C6 alkyl;
- a C3-C7 cycloalkyl;
- a C6-C10 aryl;
- a C5-C10-membered heteroaryl group;
- a —CF3 group;
- a —CN group;
- a —ORi group;
- a —OSO3H group;
- a —NRiRii group;
- and a guanidinyl group;
- Z represents a C6-C10 aryl, a C5-C10-membered heteroaryl groups, a C1-C6 alkyl, a C3-C7 cycloalkyl, a C4-C7 heterocycloalkyl, said C6-C10 aryl, C5-C10-membered heteroaryl groups, C1-C6 alkyl, C3-C7 cycloalkyl, and C4-C7 heterocycloalkyl optionally substituted by at least one Yz group;
- said Y1, Y2, Y12, Y3, Y4, Y5, and Yz, groups each independently selected from:
- a C1-C6 alkyl;
- a C3-C7 cycloalkyl;
- a C6-C10 aryl;
- a C5-C10-membered heteroaryl group;
- a halogen;
- a —CF3 group;
- a —CN group;
- a —ORi group;
- a —OSO3H group;
- a —NRiRii group;
- and
- a guanidinyl group;
- Ri and Rii each independently represent H, a C1-C6 alkyl group, a C3-C10 cycloalkyl group or an aralkyl group;
- or together form with the nitrogen atom to which they are attached a C4-C7 heterocycloalkyl group;
- (b) contacting the deprotected form of the compound of formula (I) with a buffered media to obtain a solution comprising the deprotected form of the compound of formula (I);
- (c) contacting the solution of the deprotected form of the compound of formula (I) with a luminogenic protein;
- and
- (d) detecting a luminescence signal, so as to detect and/or measure the enzymatic activity of the luminogenic protein.
A method to detect and/or measure an enzymatic activity of a luminogenic protein, comprising:
- (a) contacting a compound of following formula (I) with a solution comprising a strong acid to obtain a deprotected form of the compound of formula (I);
- wherein the deprotected form of the compound of formula (I) is a compound according to formula (III);
- wherein:
- R1 represents H or a group selected from C1-C6 alkyl, C3-C7 cycloalkyl, C6-C10 aryl, aralkyl and C5-C10-membered heteroaryl groups, said C1-C6 alkyl, C3-C7 cycloalkyl, C6-C10 aryl, aralkyl and C5-C10-membered heteroaryl groups optionally substituted by at least one Y1 group;
- R2 represents a group selected from C6-C10 aryl and C5-C10-membered heteroaryl groups, said C6-C10 aryl and C5-C10-membered heteroaryl groups optionally substituted by at least one Y2 group;
- R3 represents a C1-C6 alkyl, an aralkyl group, a hetaralkyl group or a heterocycloalkyl-CH2— group substituted by at least one Y3 group;
- R4 represents H or a group selected from C1-C6 alkyl and C3-C7 cycloalkyl groups, said C1-C6 alkyl and C3-C7 cycloalkyl groups optionally substituted by at least one Y4 group;
- R5 represents a —C(═O)Ra group or a —C(═O)ORa group;
- wherein when R5 is the —C(═O)Ra group:
- Ra represents H, a C1-C6 alkyl group, a C3-C7 cycloalkyl group, a C6-C10 aryl, or an aralkyl group, said C1-C6 alkyl group, C3-C7 cycloalkyl group, C6-C10 aryl, and aralkyl group optionally substituted by at least one Ya group, selected from a C1-C6 alkyl, a C3-C7 cycloalkyl, a C6-C10 aryl, a C5-C10-membered heteroaryl group, a halogen, a —CF3 group, a —CN group, a —ORi group, a —OSO3H group, a —NRiRii group, and a guanidinyl group;
- and
- wherein when R5 is the —C(═O)ORa group:
- (i) Ra represents H, a C1-C6 alkyl group, a C3-C7 cycloalkyl group optionally substituted by at least one Ya group selected from a C1-C6 alkyl;
- a C3-C7 cycloalkyl;
- a C6-C10 aryl;
- a C5-C10-membered heteroaryl group;
- a halogen;
- a —CF3 group;
- a —CN group;
- a —ORi group;
- a —OSO3H group;
- a —NRiRii group;
- and a guanidinyl group;
- or
- (ii) Ra represents a C6-C10 aryl group optionally substituted by at least one Ya group selected from a C1-C6 alkyl;
- a C3-C7 cycloalkyl;
- a C6-C10 aryl;
- a C5-C10-membered heteroaryl group;
- a —CF3 group;
- a —CN group;
- a —ORi group;
- a —OSO3H group;
- a —NRiRii group;
- and a guanidinyl group;
- Z represents a group of following formula:
- an oxazolyl;
- or an oxadiazolyl;
- R, R′, R″ and R′″ each independently represent H or a group selected from:
- a C1-C6 alkyl group;
- a C3-C7 cycloalkyl group;
- a halogen;
- a —ORi group;
- and
- a —CF3 group;
- and
- X represents O or S;
- said Y1, Y2, Y3 and Y4, groups each independently selected from:
- a C1-C6 alkyl group;
- a C3-C7 cycloalkyl group;
- a halogen;
- and
- a —ORii group;
- and
- Ri and Rii each independently represent H, a C1-C6 alkyl group, a C3-C10 cycloalkyl group or an aralkyl group;
- provided that:
- when Z═Z1:
- at least one of R, R′ and R″ does not represent H;
- or
- when R, R′ and R″ represent H, then R2 represents a group selected from C6-C10 aryl and C5-C10-membered heteroaryl groups substituted by at least one halogen group;
- or R3 represents a group selected from C6-C10 aralkyl groups substituted by at least one halogen group;
- when Z═Z2:
- at least one of R, R′, R″ and R″ does not represent H;
- when R, R′, R″ and R′″ represent H;
- then R2 represents a group selected from C6-C10 aryl and C5-C10-membered heteroaryl groups substituted by at least one halogen group;
- or R3 represents a group selected from C6-C10 aralkyl groups substituted by at least one halogen group;
- when R, R′ and R′″ represent H and R″ represents a C1-C6 alkyl group or a —ORi group;
- then R2 does not represent a 4-HO-Ph- group;
- or R3 represents a group selected from C6-C10 aralkyl groups substituted by at least one halogen group;
- (b) contacting the deprotected form of the compound of formula (I) with a buffered media to obtain a solution comprising the deprotected form of the compound of formula (I);
- (c) contacting the solution of the deprotected form of the compound of formula (I) with a luminogenic protein;
- and
- (d) detecting a luminescence signal, so as to detect and/or measure the enzymatic activity of the luminogenic protein.
A method to detect and/or measure an enzymatic activity of a luminogenic protein, the method comprising:
- (a) contacting a compound of formula (I) with a solution comprising a strong acid to produce a deprotected form of compound of formula (I);
- or providing the deprotected form of the compound of formula (I);
- wherein:
- R1 represents H, a C1-C6 alkyl group, a C3-C7 cycloalkyl group, a C6-C10 aryl group, a aralkyl group or a C5-C10-membered heteroaryl group;
- R2 represents one of the following groups, optionally, substituted by at least one Y2 group:
- a C6-C10 aryl or a C5-C10-membered heteroaryl group;
- R3 represents H;
- or one of the following groups substituted by at least one Y3 group:
- a C1-C6 alkyl group, an aralkyl group, a hetaralkyl group or a heterocycloalkyl-CH2— group;
- R4 represents H, a C1-C6 alkyl group, or a C3-C7 cycloalkyl group;
- R5 represents a —C(═O)Ra group or a —C(═O)ORa group;
- Ra represents H, a C1-C6 alkyl group, a C3-C7 cycloalkyl group, or an aralkyl group;
- Z represents a C6-C10 aryl group, a C5-C10-membered heteroaryl group, a C1-C6 alkyl group, a C3-C7 cycloalkyl group, or a C4-C7 heterocycloalkyl group;
- Y2 and Y3 are each independently selected from:
- a C1-C6 alkyl;
- a C3-C7 cycloalkyl;
- a C6-C10 aryl;
- a C5-C10-membered heteroaryl group;
- a halogen;
- a —CF3 group;
- a —CN group;
- a —ORi group;
- a —OSO3H group;
- a —NRiRii group;
- and
- a guanidinyl group;
- and
- Ri and Rii each independently represent H, a C1-C6 alkyl group, a C3-C10 cycloalkyl group or an aralkyl group;
- or together with the nitrogen atom to which they are attached form a C4-C7 heterocycloalkyl group;
- (b) contacting the deprotected form of the compound of formula (I) with a buffered media to obtain a solution comprising the deprotected form of the compound of formula (I);
- (c) contacting the solution of the deprotected form of the compound of formula (I) with a luminogenic protein;
- and
- (d) detecting a luminescence signal, wherein the luminescence signal correlates to the presence of enzymatic activity of the luminogenic protein.
Dependencies are inferred from the claim text.