Engineered enzymes and method for the synthesis of diverse tyrosine analogs
AssigneeCalifornia Institute of Technology
InventorsPatrick J. Almhjell, Frances H. Arnold
Life of this patent
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Abstract
Provided herein is an engineered tryptophan synthase β-subunit (TrpB) that catalyzes the synthesis of tyrosine, tyrosine analogs, or salts thereof. Also provided herein are methods for preparing tyrosine, tyrosine analogs, or a salt thereof using the engineered TrpB described herein.
Claims27
An engineered tryptophan synthase β-subunit (TrpB) comprising an amino acid substitution at a position corresponding to amino acid residue E105 of SEQ ID NO:
- 1, wherein the engineered TrpB catalyzes the synthesis of a tyrosine, a tyrosine analog, or a salt thereof.
An engineered tryptophan synthase β-subunit (TrpB) comprising the amino acid sequence of any one of SEQ ID NOS:
- 4-11, wherein the engineered TrpB catalyzes the synthesis of a compound, wherein the compound is tyrosine or a tyrosine analog or a salt thereof.
A method for preparing a tyrosine or a tyrosine analog or a salt thereof, the method comprising:
- combining in a reaction mixture:
- (i) a first substrate;
- (ii) a second substrate;
- and (iii) an engineered tryptophan synthase β-subunit (TrpB) comprising an amino acid substitution at a position corresponding to amino acid residue E105 of SEQ ID NO:
- 1;
- and
- maintaining the reaction mixture under conditions sufficient to form the tyrosine or a tyrosine analog or a salt thereof.
A method of preparing a compound of Formula I, II, or III:
- or a salt thereof,
- wherein R is (A), (B), or (C):
- the method comprising:
- combining in a reaction mixture:
- (i) a 3-hydroxy amino acid, (ii) phenol or a phenol analog, and (iii) an engineered tryptophan synthase α-subunit (TrpB) comprising an amino acid subtitution at a position corresponding to amino acids residue E105 of SEQ ID NO:
- 1;
- and
- maintaining the reaction mixture under conditions sufficient to form the compound according to Formula I, II, or III;
- wherein:
- R1 is hydrogen or C1-8 alkyl, which is optionally substituted with one or more R1a;
- each R1a is independently selected from the group consisting of hydrogen, halogen, —OH, —CN, —N3, —NO2, C1-12 alkyl, C6-14 aryl, C2-12 alkenyl, C1-12 alkynyl, C1-12 alkoxy, C1-12 thioalkoxy, —N(R1b)2, —C(O)R1c, —C(O)N(R1b)2, —NR1bC(O)R1c, and —OC(O)R1c;
- each R1b is independently selected from the group consisting of hydrogen and C1-6 alkyl;
- each R1c is independently selected from the group consisting of hydrogen, —OH, halogen, C1-6 alkyl, C1-6 alkoxy;
- R2, R3, R4, and R5 are independently selected from the group consisting of hydrogen, halogen, C1-8 alkyl, which is optionally substituted with one or more R2a;
- each R2a is independently selected from the group consisting of hydrogen, halogen, —OH, —CN, —N3, —NO2, C1-12 alkyl, C2-12 alkenyl, C1-12 alkynyl, C1-12 alkoxy, C1-12 thioalkoxy, —N(R2b)2, —C(O)R2c, —C(O)N(R2b)2, —NR2bC(O)R2c, and —OC(O)R2c;
- each R2b is independently selected from the group consisting of hydrogen and C1-6 alkyl;
- each R2c is independently selected from the group consisting of hydrogen, —OH, halogen, C1-6 alkyl, C1-6 alkoxy;
- R6 is hydrogen or C1-8 alkyl, which is optionally substituted with one or more R3a;
- each R3a is independently selected from the group consisting of hydrogen, halogen, —OH, —CN, —N3, —NO2, C1-12 alkyl, C2-12 alkenyl, C1-12 alkynyl, C1-12 alkoxy, C1-12 thioalkoxy,
- —N(R3b)2, —C(O)R3c, —C(O)N(R3b)2, —NR3bC(O)R3c, and —OC(O)R3c;
- each R3b is independently selected from the group consisting of hydrogen and C1-6 alkyl;
- each R3c is independently selected from the group consisting of hydrogen, —OH, halogen, C1-6 alkyl, C1-6 alkoxy;
- n is selected from 0, 1, 2, 3, 4, or 5;
- m is selected from 0, 1, 2, 3, 4, 5, or 6;
- X is —C(R7) or —N;
- wherein R7 is hydrogen or C1-8 alkyl, which is optionally substituted with one or more R4a;
- each R4a is independently selected from the group consisting of hydrogen, halogen, —OH, —CN, —N3, —NO2, C1-12 alkyl, C2-12 alkenyl, C1-12 alkynyl, C1-12 alkoxy, C1-12 thioalkoxy, —N(R4b)2, —C(O)R4c, —C(O)N(R4b)2, —NR4bC(O)R4c, and —OC(O)R4c;
- each R4b is independently selected from the group consisting of hydrogen and C1-6 alkyl;
- and
- each R4c is independently selected from the group consisting of hydrogen, —OH, halogen, C1-6 alkyl, C1-6 alkoxy.
An engineered tryptophan synthase β-subunit (TrpB) comprising an amino acid substitution at a position corresponding to amino acid residue E105 of SEQ ID NO:
- 1 selected from the group consisting of serine (S) and proline (P).
Dependencies are inferred from the claim text.