Compositions and methods for treating viral infections
AssigneeG Tech Bio LLC
InventorSerhat Gumrukcu
Life of this patent
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Abstract
The disclosure provides methods and compositions utilizing recombinant nucleic acid constructs or a replication incompetent virus-like particle encoding a chemokine, cytokine, or apoptosis inducing protein (e.g. Caspase 9 (Casp9)), or other toxins in a form which can only be transcribed in the presence of a viral polymerase. These methods can be adapted to target many viral infections and reduce or eliminate viral load, and provide a fundamentally different treatment for viral infections.
Claims18
A recombinant nucleic acid molecule comprising:
- a negative strand nucleic acid molecule or a pregenomic RNA (pgRNA) nucleic acid molecule encoding a chemokine, a cytokine, an apoptosis inducing protein, a diphtheria toxin A, a diphtheria toxin A fragment, or any combination thereof, flanked by a first viral transcription recognition signal and a second viral transcription recognition signal, wherein the negative strand nucleic acid molecule or pgRNA nucleic acid molecule is from a virus selected from the group consisting of hepatitis B virus, influenza virus and coronavirus;
- a first promoter upstream (5′) of the first viral transcription recognition signal and the 3′ end of the negative strand nucleic acid molecule or pgRNA nucleic acid molecule, and
- a second promoter located between the second viral transcription recognition signal and the 5′ end of the negative strand nucleic acid molecule or pgRNA nucleic acid molecule encoding a chemokine, a cytokine, an apoptosis inducing protein, a diphtheria toxin A, a diphtheria toxin A fragment, or any combination thereof,
- wherein
- (i) the first promoter and the second promoter are oriented in opposite direction and toward each other;
- (ii) the second promoter and the second viral transcription recognition signal are upstream (5′) of the 5′ end of the negative strand nucleic acid molecule or pgRNA nucleic acid molecule;
- (iii) the first and second viral transcription recognition signals are oriented in the same direction;
- and
- (iv) wherein
- a. if the negative strand nucleic acid molecule or pgRNA nucleic acid molecule is from a hepatitis B virus, each of the first and second viral transcription recognition signals comprises the epsilon recognition signal sequence of SEQ ID NO:
- 1;
- b. if the negative strand nucleic acid molecule or pgRNA nucleic acid molecule is from an influenza virus, the second viral transcription recognition signal comprises the sequence of SEQ ID NO:
- 22 and the first viral transcription recognition signal comprises the sequence of SEQ ID NO:
- 23;
- or
- c. if the negative strand nucleic acid molecule or pgRNA nucleic acid molecule is from a coronavirus, each of the first and second viral transcription recognition signals comprises the sequence of SEQ ID NO:
- 25, SEQ ID NO:
- 26, SEQ ID NO:
- 28, or SEQ ID NO:
- 30.
A replication incompetent virus-like particle (VLP) comprising:
- an optional translocation motif (TLM) fused to a capsid protein from a hepatitis B viral capsid or an influenza viral capsid or coronavirus fusion protein;
- a negative strand nucleic acid molecule or a pregenomic RNA (pgRNA) nucleic acid molecule encoding a chemokine, a cytokine, an apoptosis inducing protein, a diphtheria toxin A, a diphtheria toxin A fragment, or any combination thereof, flanked by a first and second viral transcription recognition signals, wherein the negative strand nucleic acid molecule or pgRNA nucleic acid molecule is from a virus selected from the group consisting of hepatitis B virus, influenza virus and coronavirus;
- a first promoter upstream (5′) of the first viral transcription recognition signal and the 3′ end of the negative strand nucleic acid molecule or pgRNA nucleic acid molecule, and
- a second promoter located between the second viral transcription recognition signal and the 5′ end of the negative strand nucleic acid molecule or pgRNA nucleic acid molecule encoding a chemokine, a cytokine, an apoptosis inducing protein, a diphtheria toxin A, a diphtheria toxin A fragment, or any combination thereof,
- wherein
- (i) the first promoter and the second promoter are oriented in opposite direction and toward each other;
- (ii) the second promoter and the second viral transcription recognition signal are upstream (5′) of the 5′ end of the negative strand nucleic acid molecule or pgRNA nucleic acid molecule;
- (iii) the first and second viral transcription recognition signals are oriented in the same direction;
- and
- (iv) wherein
- a. if the negative strand nucleic acid molecule or pgRNA nucleic acid molecule is from a hepatitis B virus, each of the first and second viral transcription recognition signals comprises the epsilon recognition signal sequence of SEQ ID NO:
- 1;
- b. if the negative strand nucleic acid molecule or pgRNA nucleic acid molecule is from an influenza virus, the second viral transcription recognition signal comprises the sequence of SEQ ID NO:
- 22 and the first viral transcription recognition signal comprises the sequence of SEQ ID NO:
- 23;
- or
- c. if the negative strand nucleic acid molecule or pgRNA nucleic acid molecule is from a coronavirus, each of the first and second viral transcription recognition signals comprises the sequence of SEQ ID NO:
- 25, SEQ ID NO:
- 26, SEQ ID NO:
- 28, or SEQ ID NO:
- 30.
A replication incompetent virus-like particle (VLP) comprising:
- a negative strand nucleic acid molecule or a pregenomic RNA (pgRNA) nucleic acid molecule encoding a chemokine, a cytokine, an apoptosis inducing protein, a diphtheria toxin A, a diphtheria toxin A fragment, or any combination thereof, flanked by a first and second viral transcription recognition signals, wherein the negative strand nucleic acid molecule or pgRNA nucleic acid molecule is from a virus selected from the group consisting of hepatitis B virus, influenza virus and coronavirus;
- a first promoter upstream (5′) of the first viral transcription recognition signal and the 3′ end of the negative strand nucleic acid molecule or pgRNA nucleic acid molecule;
- and
- a second promoter located between the second viral transcription recognition signal and the 5′ end of the negative strand nucleic acid molecule or pgRNA nucleic acid molecule encoding a chemokine, a cytokine, an apoptosis inducing protein, a diphtheria toxin A, a diphtheria toxin A fragment, or any combination thereof,
- wherein
- (i) the first promoter and the second promoter are oriented in opposite direction and toward each other;
- (ii) the second promoter and the second viral transcription recognition signal are upstream (5′) of the 5′ end of the negative strand nucleic acid molecule or pgRNA nucleic acid molecule;
- (iii) the first and second viral transcription recognition signals are oriented in the same direction;
- and
- (iv) wherein
- a. if the negative strand nucleic acid molecule or pgRNA nucleic acid molecule is from a hepatitis B virus, each of the first and second viral transcription recognition signals comprises the epsilon recognition signal sequence of SEQ ID NO:
- 1;
- b. if the negative strand nucleic acid molecule or pgRNA nucleic acid molecule is from an influenza virus, the second viral transcription recognition signal comprises the sequence of SEQ ID NO:
- 22 and the first viral transcription recognition signal comprises the sequence of SEQ ID NO:
- 23;
- or
- c. if the negative strand nucleic acid molecule or pgRNA nucleic acid molecule is from a coronavirus, each of the first and second viral transcription recognition signals comprises the sequence of SEQ ID NO:
- 25, SEQ ID NO:
- 26, SEQ ID NO:
- 28, or SEQ ID NO:
- 30.
Dependencies are inferred from the claim text.