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US 12,134,630 B2Granted
Compositions and methods for liquid phase oligonucleotide synthesis
AssigneeHongene Biotech Corporation
InventorsGaomai Yang, Jingshe Song, Shengdong Wang, Yun-Chiao Yao, Hongrong Yang, David Yu, Aldrich N.K. Lau
Life of this patent
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Abstract
Embodiments of the present application relate to polymers used as polymeric polyvalent hubs for liquid phase oligonucleotide synthesis. Methods for making an oligonucleotide by liquid phase oligonucleotide synthesis using the polymers are also provided.
Claims38
A polymer for liquid phase oligonucleotide synthesis, having the structure of Formula (I):
- wherein:
- R is H, or unsubstituted or substituted C1-C6 alkyl;
- W is C1-C20 alkylene, a 2 to 20 membered heteroalkylene, or a bond;
- Q is
- L1 is C1-C20 alkylene, 2 to 20 membered heteroalkylene, optionally substituted phenylene, optionally substituted 5 to 6 membered heteroarylene, or optionally substituted C3-C10 cycloalkylene, or C1-C20 alkylene or 2 to 20 membered heteroalkylene in which one or more methylene repeating units is each independently replaced by a group selected from the group consisting of optionally substituted phenylene, optionally substituted 5 to 6 membered heteroarylene, optionally substituted C3-C10 cycloalkylene, —C(═O)—, —CH═CH—, and —C≡C—;
- each of R1 and R2 is independently —OR3 or —NR4aR4b;
- R3 is H, a hydroxy protecting group, or
- each R4a and R4b is independently H, —C(═O)(C1-C6 alkyl), —C(═O) phenyl, an amino protecting group, or
- or R4a and R4b taken together is a divalent amino protecting group;
- each of L2a and L2b is independently C1-C20 alkylene, 2 to 20 membered heteroalkylene, optionally substituted phenylene, optionally substituted 5 to 6 membered heteroarylene, or optionally substituted C3-C10 cycloalkylene, or C1-C20 alkylene or 2 to 20 membered heteroalkylene in which one or more methylene repeating units is each independently replaced by a group selected from the group consisting of optionally substituted phenylene, optionally substituted 5 to 6 membered heteroarylene, optionally substituted C3-C10 cycloalkylene, —C(═O)—, —CH═CH—, and —C≡C—:
- each of R5a, R5b, R6a and R6b is independently H, —OR7 or —NR8aR8b;
- each of R7 is independently H, a hydroxy protecting group, or
- each of R8a and R8b is independently H, —C(═O)(C1-C6 alkyl), —C(═O) phenyl, an amino protecting group, or
- or R8a and R8b taken together is a divalent amino protecting group;
- each of L3a and L3b is independently C1-C20 alkylene, 2 to 20 membered heteroalkylene, optionally substituted phenylene, optionally substituted 5 to 6 membered heteroarylene, or optionally substituted C3-C10 cycloalkylene, or C1-C20 alkylene or 2 to 20 membered heteroalkylene in which one or more methylene repeating units is each independently replaced by a group selected from the group consisting of optionally substituted phenylene, optionally substituted 5 to 6 membered heteroarylene, optionally substituted C3-C10 cycloalkylene, —C(═O)—, —CH═CH—, and —C≡C—:
- each of R9a, R9b, R10a and R10b is independently H, —OR11 or —NR12aR12b;
- each of R11 is independently H, a hydroxy protecting group, or
- each of R12a and R12b is independently H, —C(═O)(C1-C6 alkyl), —C(═O) phenyl, an amino protecting group, or
- or R12a and R12b taken together is a divalent amino protecting group;
- each of L4a and L4b is independently C1-C20 alkylene, 2 to 20 membered heteroalkylene, optionally substituted phenylene, optionally substituted 5 to 6 membered heteroarylene, or optionally substituted C3-C10 cycloalkylene, or C1-C20 alkylene or 2 to 20 membered heteroalkylene in which one or more methylene repeating units is each independently replaced by a group selected from the group consisting of optionally substituted phenylene, optionally substituted 5 to 6 membered heteroarylene, optionally substituted C3-C10 cycloalkylene, —C(═O)—, —CH═CH—, and —C≡C—:
- each of R13a, R13b, R14a and R14b is independently H, —OH, protected hydroxy, —NH2, —NH (optionally substituted C1-C6 alkyl), or protected amino;
- each of m1, m2, m3, m4, m5, m6 and m7 is independently 0 or 1;
- and
- j is an integer from 150 to 1500.
21 more elements
Dependencies are inferred from the claim text.