Diagnostic methods based on lipid profiles
AssigneeRubio Metabolomics, S.L.U.
InventorsIbon Martinez Arranz, Rebeca Mayo Sanchez, Azucena Castro Espido, Jose Maria Mato De La Paz
Life of this patent
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Abstract
The present invention relates to methods for the diagnosis of NAFLD in a subject, and for the differential diagnosis of NASH or steatosis in a subject suffering from NAFLD, based on the determination in a sample of metabolic markers, particularly lipid metabolic markers.
Claims7
A method for discriminating between non-alcoholic steatohepatitis (NASH) and steatosis and correspondingly treating a patient diagnosed with non-alcoholic fatty liver disease (NAFLD), the method comprising:
- (i) fractionating by liquid chromatography a sample isolated from the patient;
- (ii) determining by mass spectrometry the levels of one or more metabolic markers selected from the group consisting of:
- (a) metabolic marker TG(44:1) comprising at least one of analytes TG(14:0+18:1+12:0) and TG(16:0+16:1+12:0);
- (b) metabolic marker TG(48:2) comprising at least one of analytes TG(14:0+18:1+16:1) and TG(16:0+18:2+14:0);
- (c) metabolic marker TG(49:1) comprising analyte TG(15:0+18:1+16:0);
- (d) metabolic marker TG(50:2) comprising at least one of analytes TG(16:0+18:1+16:1), TG(18:1+18:1+14:0), and TG(16:0+18:2+16:0);
- (e) metabolic marker TG(51:1) comprising analyte TG(16:0+17:0+18:1);
- (f) metabolic marker TG(51:2) comprising analyte TG (16:0+17:1+18:1);
- (g) metabolic marker TG(51:3) comprising analyte TG(18:2+18:1+15:0);
- (h) metabolic marker TG(52:0) comprising analyte TG(16:0+18:0+18:0);
- (i) metabolic marker TG(52:3) comprising analyte TG(16:0+18:1+18:2);
- (j) metabolic marker TG(52:4) comprising analyte TG(16:0+18:2+18:2);
- (k) metabolic marker TG(53:3) comprising at least one of analytes TG(18:2+18:1+17:0) and TG(18:1+18:1+17:1);
- (l) metabolic marker TG(54:2) comprising analyte TG(18:0+18:1+18:1);
- (m) metabolic marker TG(54:3) comprising at least one of analytes TG(20:2+20:1+14:0), TG(20:2+18:1+16:0), TG(20:1+18:2+16:0), and TG(18:2+18:1+18:0);
- (n) metabolic marker TG(54:5) comprising analyte TG(18:2+18:2+18:1);
- (o) metabolic marker TG(54:
- 6) comprising analyte TG(20:
- 4+18:2+16:
- 0);
- (p) metabolic marker TG(56:3) comprising analyte TG(18:1+20:1+18:1);
- (q) metabolic marker TG(56:7) comprising at least one of analytes TG(22:5+18:2+16:0) and TG(20:4+18:2+18:1);
- and
- (r) metabolic marker TG(56:8) comprising analyte TG(22:6+18:2+16:0),
- (iii) generating a predictive score based on relative values of the metabolic markers in a logistic regression model to discriminate between NASH and steatosis, wherein the predictive score is given by formula (I)
- predictive
-
- score
- =
- 1
- 1
- +
- e
- -
- z
- (
- I
- )
- wherein
- Z
- =
- ∑
- i
-
- c
- i
-
- [
- A
- i
- 1
- ]
-
- [
- A
- i
- 2
- ]
- ci is the coefficient estimated for the model for the parameter i, wherein each parameter i of the model includes Ai1 and Ai2, wherein Ai1 is a first metabolic marker of (a)-(r) determined in (ii) or a first metabolic marker logarithm, and Ai2 is a second metabolic marker of (a)-(r) determined in (ii), second metabolic marker logarithm, body mass index, or body mass index logarithm and [Ai1] and [Ai2] are corresponding relative values of Ai1 and Ai2 based on metabolic marker levels obtained in (ii);
- and
- (iv) treating the patient for NASH when the predictive score is ≥0.5, and treating the patient for steatosis when the predictive score is <0.5.
A method for discriminating between non-alcoholic steatohepatitis (NASH) and steatosis and correspondingly treating a subject previously diagnosed with non-alcoholic fatty liver disease (NAFLD), the method comprising:
- (i) fractionating by liquid chromatography a serum sample isolated from the subject;
- (ii) determining by mass spectrometry the levels of one or more metabolic markers selected from the group consisting of:
- (a) metabolic marker TG(44:1) comprising at least one of analytes TG(14:0+18:1+12:0) and TG(16:0+16:1+12:0);
- (b) metabolic marker TG(48:2) comprising at least one of analytes TG(14:0+18:1+16:1) and TG(16:0+18:2+14:0);
- (c) metabolic marker TG(49:1) comprising analyte TG(15:0+18:1+16:0);
- (d) metabolic marker TG(50:1) comprising analyte TG(16:0+18:1+16:0);
- (e) metabolic marker TG(51:1) comprising analyte TG(16:0+17:0+18:1);
- (f) metabolic marker TG(51:2) comprising analyte TG (16:0+17:1+18:1);
- (g) metabolic marker TG(51:3) comprising analyte TG(18:2+18:1+15:0);
- (h) metabolic marker TG(52:0) comprising analyte TG(16:0+18:0+18:0);
- (i) metabolic marker TG(52:3) comprising analyte TG(16:0+18:1+18:2);
- (j) metabolic marker TG(52:4) comprising analyte TG(16:0+18:2+18:2);
- (k) metabolic marker TG(53:3) comprising at least one of analytes TG(18:2+18:1+17:0) and TG(18:1+18:1+17:1);
- (l) metabolic marker TG(54:2) comprising analyte TG(18:0+18:1+18:1);
- (m) metabolic marker TG(54:3) comprising at least one of analytes TG(20:2+20:1+14:0), TG(20:2+18:1+16:0), TG(20:1+18:2+16:0), and TG(18:2+18:1+18:0);
- (n) metabolic marker TG(54:5) comprising analyte TG(18:2+18:2+18:1);
- (o) metabolic marker TG(54:6) comprising analyte TG(20:4+18:2+16:0);
- (p) metabolic marker TG(56:3) comprising analyte TG(18:1+20:1+18:1);
- (q) metabolic marker TG(56:7) comprising at least one of analytes TG(22:5+18:2+16:0) and TG(20:4+18:2+18:1);
- and
- (r) metabolic marker TG(56:8) comprising analyte TG(22:6+18:2+16:0);
- and
- (iii) comparing each of the levels obtained in (ii) to a reference value to obtain a relative value;
- (iv) generating a predictive score based on the relative values of the metabolic markers in a logistic regression model to discriminate between NASH and steatosis, wherein the predictive score is given by formula (I)
- predictive
-
- score
- =
- 1
- 1
- +
- e
- -
- z
- (
- I
- )
- wherein
- Z
- =
- ∑
- i
-
- c
- i
-
- [
- A
- i
- 1
- ]
-
- [
- A
- i
- 2
- ]
- ci is the coefficient estimated for the model for the parameter i, wherein each parameter i of the model includes Ai1 and Ai2 wherein Ai1 is a first metabolic marker of (a)-(r) determined in (ii) or a first metabolic marker logarithm, and Ai2 is a second metabolic marker of (a)-(r) determined in (ii), second metabolic marker logarithm, body mass index, or body mass index logarithm and [Ai1] and [Ai2] are corresponding relative values of Ai1 and Ai2;
- and
- (v) treating the patient for NASH when the predictive score is ≥0.5, and treating the patient for steatosis when the predictive score is <0.5.
Dependencies are inferred from the claim text.