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US 11,898,211 B2Granted
Biosensors for detecting and/or neutralizing bioavailable uranium and related U-sensitive genetic molecular components, gene cassettes, vectors, genetic circuits, compositions, methods and systems
AssigneeLawrence Livermore National Security, LLC
InventorDan Mcfarland Park
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Abstract
UO2F2 biosensors, and related U-sensing and/or F-sensing genetic molecular components, genetic circuits, compositions, methods and systems are described, which in several embodiments can be used to detect and/or neutralize uranium and in particular bioavailable UO2F2.
Claims40
A UO2F2 biosensor comprising a genetically engineered bacterial cell capable of heterologously and/or natively expressing histidine kinase 1363, and U-sensitive transcriptional regulator 1362;
- wherein the bacterial cell is an engineered bacterial cell including a 1362 U-sensing genetic reportable molecular component and/or a 1362 U-sensing/U-neutralizing genetic molecular component, each comprising a U-sensitive promoter in a configuration wherein the U-sensitive promoter directly initiates expression of the U-sensing reportable molecular component and/or of the U-sensing U-neutralizing molecular component in presence of bioavailable U;
- wherein the U-sensitive promoter is
- a 1362 U-sensitive prompter comprising a U-sensitive transcriptional 1362 binding site having a DNA sequence
- (SEQ ID NO:
- 1)
- N1N2N3N4N5N6N7N8N9N10N11N12N13N14N15N16N17N18,
- in which
- N1 is C or T;
- N2 is G or A;
- N3 is T or C;
- N4 is C;
- N5 is A or G;
- N6 is G or C;
- N7 C or G;
- N8 is any nucleotide;
- N9 is any nucleotide;
- N10 is any nucleotide;
- N11 is any nucleotide;
- N12 is T or C;
- N13 is G;
- N14 is T or C;
- N15 is C;
- N16 is A or C;
- N17 is G;
- and
- N18 is C or G,
- and in which N1 to N17 are selected independently
- and wherein the genetically modified bacterial cell is an engineered bacterial cell further comprising an F-sensing riboswitch within at least one of
- the U-sensing reportable genetic molecular component in a configuration wherein the U-sensing reportable genetic molecular component, is transcribed in presence of an effective amount of bioavailable fluoride,
- an F-sensing reportable genetic molecular component in a configuration wherein the F-sensing reportable genetic molecular component is transcribed in presence of an effective amount of bioavailable fluoride, and
- an F sensitive genetic circuit in which at least one molecular component is a reportable molecular component (and in particular one or more reportable genetic molecular component and/or one or more reportable cellular molecular component), the reportable molecular component expressed when the genetic circuit operates according to the circuit design in presence of bioavailable F.
28 more elements
A UO2F2-sensing genetic reportable component comprising:
- one or more U sensitive promoters comprising a U-sensitive 1362 binding site having a DNA sequence
- (SEQ ID NO:
- 1)
- N1N2N3N4N5N6N7N8N9N10N11N12N13N14N15N16N17N18,
- in which
- N1 is C or T;
- N2 is G or A;
- N3 is T or C;
- N4 is C;
- N5 is A or G;
- N6 is G or C;
- N7 C or G;
- N8 is any nucleotide;
- N9 is any nucleotide;
- N10 is any nucleotide;
- N11 is any nucleotide;
- N12 is T or C;
- N13 is G;
- N14 is T or C;
- N15 is C;
- N16 is A or C;
- N17 is G;
- and
- N18 is C or G,
- and in which N1 to N17 are selected independently
- together with
- a U-sensing reportable molecular component,
- wherein at least one of the one or more U-sensitive promoters and the U-sensing reportable molecular component, comprises an F-sensing riboswitch in a single output configuration wherein the U-sensing reportable genetic molecular component, is transcribed in presence of an effective amount of bioavailable fluoride,
- and wherein the one or more U sensitive promoters and the U-sensing reportable molecular component are in a configuration wherein the one or more U sensitive promoters directly initiate expression of the U-sensing reportable molecular component in presence of bioavailable U and bioavailable Fluoride.
26 more elements
Dependencies are inferred from the claim text.