Chimeric reporter West Nile/dengue viruses and their use
AssigneeThe United States of America, as represented by the Secretary, Department of Health and Human Services
InventorClaire Y. Kinney
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Abstract
Chimeric flaviviruses engineered to contain a reporter gene and chimeric nucleic acid molecules encoding the chimeric flaviviruses are described. The chimeric flaviviruses further include genomic non-coding regions, non-structural proteins, and at least a portion of a capsid (C) protein from West Nile virus (WNV), and premembrane (prM) and envelope (E) proteins from dengue virus (DENV). Diagnostic assays that utilize chimeric West Nile/dengue viruses are further described.
Claims29
A chimeric flavivirus nucleic acid molecule comprising in the 5′ to 3′ direction:
- (i) a 5′ non-coding region from a West Nile virus (WNV) genome;
- (ii) a nucleic acid encoding amino acid residues 1-35 of a capsid (C) protein of the WNV, wherein residues 1-35 of the C protein correspond to residues 289-323 of the polyprotein of SEQ ID NO:
- 2;
- (iii) a reporter gene;
- (iv) a nucleic acid encoding a 2A proteolytic site;
- (v) a nucleic acid encoding a flavivirus C protein, comprising:
- (a) a 5′ portion encoding amino acid residues 1-35 of a C protein of the WNV,
- wherein residues 1-35 of the C protein correspond to residues 289-323 of the polyprotein of SEQ ID NO:
- 2, and wherein the 5′ portion comprises at least one silent mutation;
- and
- (b) a 3′ portion encoding amino acid residue 36 to the C-terminal most amino acid residue of the flavivirus C protein, wherein residue 36 corresponds to residue 324 of the polyprotein of SEQ ID NO:
- 2, and wherein the 3′ portion comprises a WNV premembrane (prM) signal sequence, a DENV prM signal sequence or a chimeric WNV/DENV prM signal sequence;
- (vi) a nucleic acid encoding a prM protein and an envelope (E) protein from the DENV;
- (vii) a nucleic acid encoding non-structural proteins NS1, NS2A, NS2B, NS3, NS4A, NS4B and NS5 from the WNV;
- and
- (viii) a 3′ non-coding region from the WNV genome.
Dependencies are inferred from the claim text.