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US 11,414,656 B2Granted
Methods for enriching for duplex reads in sequencing and error correction
AssigneeGrail, LLC
InventorsLijuan Ji, Nathan Hunkapiller, Suchitra Ramani
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Abstract
Methods for preparing sequencing libraries from a DNA-containing test sample, as well as methods for correcting sequencing-derived errors, are provided.
Claims20
A method for preparing a sequencing library from a test sample comprising a plurality of double-stranded DNA molecules, the method comprising:
- (a) obtaining a test sample comprising a plurality of double-stranded DNA (dsDNA) molecules, wherein the dsDNA molecules comprise a forward strand sequence and a reverse complement strand sequence;
- (b) ligating dsDNA adapters to both ends of the dsDNA molecules, generating a plurality of dsDNA adapter-molecule constructs, wherein the dsDNA adapter comprises a unique molecular identifier (UMI);
- (c) incorporating one or more biotin-labeled nucleotides into partially ligated or nicked dsDNA adapter-molecule constructs to create a plurality of labeled dsDNA adapter-molecule constructs;
- (d) depleting the labeled dsDNA adapter-molecule constructs from the test sample;
- and
- (e) amplifying the remaining dsDNA adapter-molecule constructs in the depleted test sample to generate a sequencing library.
3 more elements
Dependencies are inferred from the claim text.