# US 11,326,180 B2 · Biological control of cucumber green mottle mosaic virus

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- Number: US 11,326,180 B2
- Document ID: US11326180B2
- Status: Granted
- Kind: B2
- Application number: 17/017,992
- Filed: 2020-09-11
- Published: 2020-12-31
- Granted: 2022-05-10
- Earliest claimed: 2018-09-14
- Assignees: A&L Canada Laboratories Inc.
- Applicants: A&L Canada Laboratories, Inc.
- Inventors: Keri Wang; George Lazarovits; Yibin Liu; Magda Konopka; Greg Patterson
- Web page: https://patentgrep.com/patent/US11326180B2

## CPC

- A01H 6/346: {Cucumis sativus[cucumber]}
- C12N 15/8283: {for virus resistance}
- C12N 7/00: Viruses; Bacteriophages; Compositions thereof; Preparation or purification thereof (preparing medicinal viral antigen or antibody compositions, e.g. virus vaccines, A61K39/00)
- C12N 2770/00021: Viruses as such, e.g. new isolates, mutants or their genomic sequences
- C12N 2770/00062: by genetic engineering
- C12N 2770/14021: Viruses as such, e.g. new isolates, mutants or their genomic sequences
- A01H: NEW PLANTS OR {NON-TRANSGENIC} PROCESSES FOR OBTAINING THEM; PLANT REPRODUCTION BY TISSUE CULTURE TECHNIQUES
- C12N: MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA (microbiological testing media C12Q1/00)

## Abstract

An attenuated strain of cucumber green mottle mosaic virus (CGMMV) is useful to protect cucumber plants from infection with the wild-type infectious CGMMV strain. The genome of the attenuated virus contains at least one mutation or group of mutations selected from c.4969G>A, c.3334C>T, and a group of at least six of the mutations c.315G>A; c.1498A>G; c.1660C>T; c.3430C>T; c.3528A>G; c.4144C>T; c.4248C>T; and c.6228C>T. These mutated genomes encode one or more mutations selected from R163711 in the 186 kDa readthrough replication protein, A1092V in the 129 kDa replication protein and/or the 186 kDa readthrough replication protein, and at least six mutations selected from G86S, E480G, S534F, A1124V, N1157D, P1362L, P1397S in the 129 kDa replication protein and/or the 186 kDa readthrough replication protein, and the A156V mutation in the coat protein.

## Claims

### Claim 1

A polydeoxyribonucleotide having a sequence functionally equivalent to a sequence of a genome of an attenuated strain of cucumber green mottle mosaic virus (CGMMV), wherein the sequence of the polydeoxyribonucleotide is a variant of SEQ ID NO:18 comprising at least one of the following options a), b) and c):
a) A at the position corresponding to position 4969 of SEQ ID NO:18;
b) T at the position corresponding to position 3334 of SEQ ID NO:18; and
c) at least six nucleic acid bases selected from:
A at the position corresponding to position 315 of SEQ ID NO:18;
G at the position corresponding to position 1498 of SEQ ID NO:18;
T at the position corresponding to position 1660 of SEQ ID NO:18;
T at the position corresponding to position 3430 of SEQ ID NO:18;
G at the position corresponding to position 3528 of SEQ ID NO:18;
T at the position corresponding to position 4144 of SEQ ID NO:18;
T at the position corresponding to position 4248 of SEQ ID NO:18; and
T at the position corresponding to position 6228 of SEQ ID NO:18.

### Claim 2 (depends on 1)

The polydeoxyribonucleotide according to claim 1, wherein the sequence of the polydeoxyribonucleotide comprises one or more of A at the position corresponding to position 4969 of SEQ ID NO:18 and T at the position corresponding to position 3334 of SEQ ID NO:18.

### Claim 3 (depends on 1)

The polydeoxyribonucleotide according to claim 1, wherein the sequence of the polydeoxyribonucleotide comprises:
A at the position corresponding to position 315 of SEQ ID NO:18;
G at the position corresponding to position 1498 of SEQ ID NO:18;
T at the position corresponding to position 1660 of SEQ ID NO:18;
T at the position corresponding to position 3430 of SEQ ID NO:18;
G at the position corresponding to position 3528 of SEQ ID NO:18;
T at the position corresponding to position 4144 of SEQ ID NO:18;
T at the position corresponding to position 4248 of SEQ ID NO:18; and
T at the position corresponding to position 6228 of SEQ ID NO:18.

### Claim 4 (depends on 3)

The polydeoxyribonucleotide according to claim 3, wherein the sequence of the polydeoxyribonucleotide comprises one or more of A at the position corresponding to position 4969 of SEQ ID NO:18 and Tat the position corresponding to position 3334 of SEQ ID NO:18.

### Claim 5 (depends on 1)

The polydeoxyribonucleotide according to claim 1, wherein the sequence of the polydeoxyribonucleotide is selected from SEQ ID NO:42, SEQ ID NO:45, SEQ ID NO:48, SEQ ID NO:53, SEQ ID NO:58, SEQ ID NO:60, and variants thereof.

### Claim 6 (depends on 1)

The polydeoxyribonucleotide according to claim 1, wherein the sequence of the polydeoxyribonucleotide is selected from SEQ ID NO:42, SEQ ID NO:45, SEQ ID NO:48, SEQ ID NO:60, and variants thereof.

### Claim 7 (depends on 1)

The polydeoxyribonucleotide according to claim 1, wherein the polydeoxyribonucleotide encodes one or more proteins selected from:
a 129 kDa protein having an amino acid sequence selected from SEQ ID NO:43, SEQ ID NO:46, SEQ ID NO:49, SEQ ID NO:54, SEQ ID NO:61 and variants thereof;
a 186 kDa protein having an amino acid sequence selected from SEQ ID NO:44, SEQ ID NO:47, SEQ ID NO:50, SEQ ID NO:55, SEQ ID NO:59, SEQ ID NO:62 and variants thereof; and
a coat protein having an amino acid sequence selected from SEQ ID NO:32 and variants thereof.

### Claim 8 (depends on 1)

A vector comprising the polydeoxyribonucleotide according to claim 1.

### Claim 9 (depends on 1)

A genetically modified cell, wherein the cell expresses the polydeoxyribonucleotide according to claim 1.

### Claim 10 (depends on 9)

The genetically modified cell according to claim 9, wherein the cell is a microorganism.

### Claim 11 (depends on 9)

The genetically modified cell according to claim 9, wherein the cell is a plant cell.

### Claim 12 (depends on 9)

A composition for preventing symptoms associated with infection by wild-type CGMMV in a plant or for increasing resistance of a plant to infection by wild-type CGMMV, wherein the composition comprises a genetically modified cell according to claim 9 and an agriculturally acceptable carrier.

### Claim 13 (depends on 9)

A method for preventing symptoms associated with infection by wild-type CGMMV in a plant or for increasing resistance of a plant to infection by wild-type CGMMV, wherein the method comprises inoculating the plant with a genetically modified cell according to claim 9.

### Claim 14 (depends on 12)

A method for preventing symptoms associated with infection by wild-type CGMMV in a plant or for increasing resistance of a plant to infection by wild-type CGMMV, wherein the method comprises inoculating the plant with a composition according to claim 12.
