Medical image processing system and method thereof

A medical image processing system, comprising:

• a memory, configured to store at least one instruction;
• and
• a processor communicatively coupled to the memory, wherein the processor stores and executes the at least one instruction to:
• obtain a plurality of brain Magnetic Resonance (MR) images corresponding to a subject, wherein the brain MR images correspond to a brain space of the subject;
• access a deep brain stimulation (DBS) targets atlas corresponding to a specific stimulation area;
• transform the DBS targets atlas from a Montreal Neurological Institute (MNI) brain space to the subject brain space based on Diffeomorphic Anatomical Registration Through Exponential Lie (DARTEL) algorithm;
• mark at least one coordinate having a largest Voxel value in the specific stimulation area in the brain MR images basing on the DBS targets atlas being transformed;
• and
• store the brain MR images being marked the at least one coordinate into a predetermined format corresponding to a guiding device, so that the guiding device displays the brain MR images being targeted with the at least one coordinate for guidance in a DBS procedure.