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US 11,110,114 B2Granted
Dinucleotides
AssigneeOxford University Innovation Limited
InventorsTom Brown, Afaf Helmy El-Sagheer, Pawan Kumar
Life of this patent
Estimating the term…
Abstract
The present disclosure relates to novel dinucleotides comprising at least two locked nucleosides, one of which is directly attached to the 3′ end of the triazole linker moiety and the other of which is directly linked to the 5′ end of the triazole linker moiety and that are useful for the preparation of oligonucleotides. The disclosed dinucleotides may be used in gene therapy.
Claims36
A dinucleotide of Formula (I) or Formula (II), or a salt thereof, as shown below:
- wherein:
- C3 and C4 are the carbon atoms at the 3′ and 4′ positions of their respective 5-membered rings;
- Q1 and Q2 are independently selected from CRpRq, O, S or NRs, wherein Rp and Rq are each independently selected from H, (1-4C)alkyl or halo and R5 is selected from hydrogen or (1-4C)alkyl;
- B and B′ are each independently:
- a) a nucleobase;
- RP1 is a protecting group;
- one of X1 and X2 is (CRaRb)x, wherein x is selected from 1 or 2 and the other is CRaRb, O, NRc or S, wherein Ra and Rb are independently selected from hydrogen, (1-2C)alkyl, hydroxy, amino, halo or mercapto, and Rc is selected from hydrogen or a (1-6C)alkyl;
- or one of X1 and X2 is O and the other is NRc;
- bond a is either absent or a single bond;
- one of X3 and X4 is (CRdRc)y, wherein y is selected from 1 or 2 and the other is CRdRe, O, NRf or S, wherein Rd and Re are independently selected from hydrogen, (1-2C)alkyl, hydroxy, amino, halo or mercapto, and Rf is selected from hydrogen or a (1-6C)alkyl;
- or
- one of X3 and X4 is O and the other is NRf;
- or
- one of X3 and X4 is H and the other is selected from H, OH, NH2, OCH3 or F;
- Rz is a solid support or group of formula A1 or A2 shown below:
- with the proviso that A1 or A2 is not present when X3 is CRdRe, and Rd and Re is amino, hydroxyl, or mercapto,
- wherein:
- denotes the point of attachment;
- W1 is selected from O, S or (1-4C)alkyl;
- RP2 is a protecting group;
- Z+ is a positively charged counter ion;
- R1 and R2 are independently selected from hydrogen or (1-6C)alkyl, wherein said alkyl is optionally substituted with one or more substituents selected from halo, nitro, cyano or (1-2C)haloalkyl, with the proviso that the halo substituent is not present on the alpha carbon atom;
- or
- R1 and R2 are linked, such that, together with the nitrogen to which they attached they form a pyrrolidin-1-yl ring which is optionally substituted by one or more substituents selected from (1-4C)alkyl, halo, (1-4C)haloalkyl, (1-4C)haloalkoxy, (1-4C)alkoxy, (1-4C)alkylamino, cyano, or nitro;
- and
- L is a triazole phosphodiester mimic, optionally of Formula A or Formula B:
- wherein:
- denotes the point of attachment to C3;
- denotes the point of attachment to C4;
- R2, R3, R4, R5, R6, R7, R8 and R9 are each independently selected from hydrogen or (1-4C)alkyl, wherein each (1-4C)alkyl is optionally substituted with one or more NH2, OH or SH;
- V and Y are independently selected from O, S or NRx, wherein Rx is selected from hydrogen or (1-4C)alkyl;
- m, n, r and s are integers independently selected from 0 to 2;
- and
- p and q are integers independently selected from 0 to 1;
- with the proviso that:
- i) the sum of integers m, n, p, q, r and s is either 0, 1, 2, 3, 4, 5 or 6;
- and
- ii) when W1 is a (1-4C)alkyl, RP2 is absent;
- iii) bond a is only absent when one of X3 and X4 is H and the other is selected from H, OH, NH2, OCH3 or F.
36 more elements
Dependencies are inferred from the claim text.