US 10,949,607 B2 · Automated document filtration with normalized annotation for document searching and access

Abstract

Computer-based methods, systems, and computer readable media for managing documents within a content repository or documents within the document subsets are provided. Variant annotations within the documents may be normalized to a standard nomenclature. A request is processed for the documents including one or more search terms, where the search terms pertain to one or more from a group of genes/gene variants, drugs, and cancer terms. Documents are identified that satisfy the request by comparing the one or more search terms to the normalized annotations and specific sections of the documents, and determining a relevance of a document based on the comparison and a frequency of the one or more search terms in each of the specific sections. The identified documents are ranked in accordance with a priority based on the determined relevance.

Claims20

Dependent claims

A method of managing documents within a content repository comprising:

classifying documents within the content repository into one of a functional category and a clinical category;
normalizing variant annotations within the documents to a standard nomenclature wherein a results section of the documents is processed to obtain the normalized annotations, and wherein the results section is identified based on a presence of data generated by an experiment;
processing a request for the documents including one or more search terms, wherein the search terms pertain to one or more entities from a group of gene, drug, gene variant, and cancer;
identifying documents satisfying the request by comparing the one or more search terms to the normalized annotations and specific sections of the documents, and determining a relevance of a document based on the comparison and a frequency of the one or more search terms in each of the specific sections;
and
ranking the identified documents in accordance with a priority based on the determined relevance.

3 more elements

A computer program product for managing documents within a content repository, the computer program product comprising one or more computer readable storage media collectively having program instructions embodied therewith, the program instructions executable by a computer to cause the computer to:

classify documents within the content repository into one of a functional category and a clinical category;
normalize variant annotations within the documents to a standard nomenclature, wherein a results section of the documents is processed to obtain the normalized annotations, and wherein the results section is identified based on a presence of data generated by an experiment;
process a request for the documents including one or more search terms, wherein the search terms pertain to one or more entities from a group of gene, drug, gene variant, and cancer;
identify documents satisfying the request by comparing the one or more search terms to the normalized annotations and specific sections of the documents, and determine a relevance of a document based on the comparison and a frequency of the one or more search terms in each of the specific sections;
and
rank the identified documents in accordance with a priority based on the determined relevance.

3 more elements

Dependencies are inferred from the claim text.

Automated document filtration with normalized annotation for document searching and access

Life of this patent

Automated document filtration with normalized annotation for document searching and access

Life of this patent

Abstract

Claims20