Reverse beta oxidation pathway
AssigneeWilliam Marsh Rice University
InventorsRamon Gonzalez, James Clomburg, Clementina Dellomonaco, Elliot N. Miller
Life of this patent
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Abstract
The invention relates to recombinant microorganisms that have been engineered to produce various chemicals using genes that have been repurposed to create a reverse beta oxidation pathway. Generally speaking, the beta oxidation cycle is expressed and driven in reverse by modifying various regulation points for as many cycles as needed, and then the CoA thioester intermediates are converted to useful products by the action of termination enzymes.
Claims6
A method of making a product, comprising growing an engineered microorganism in a nutrient broth for a time sufficient to make a product, and isolating said product, wherein said product is selected from the group consisting of carboxylic acids, alkanes, or alkenes, wherein said engineered microorganism comprises:
- a) overexpression of β-oxidation cycle enzymes as compared to a corresponding wild type microorganism, wherein said enzymes comprise:
- i) a thiolase catalyzing the conversion of (Cn)-acyl CoA to β-ketoacyl-CoA;
- ii) a hydroxyacyl-coA dehydrogenase catalyzing the conversion of β-ketoacyl-CoA to β-hydroxyacyl-CoA;
- iii) an enoyl-coA hydratase catalyzing the conversion of β-hydroxyacyl-CoA to trans-Δ2-enoyl-coA;
- and
- iv) an acyl-CoA dehydrogenase or a transenoyl-CoA reductase catalyzing the conversion of trans-Δ2-enoyl-coA to (Cn+2)-acyl CoA;
- b) functional operation of a β-oxidation cycle in a reverse biosynthetic direction as recited in steps i) to iv);
- and
- c) overexpression of one or more termination enzyme(s) as compared to a corresponding wild type microorganism, wherein said termination enzyme(s) are selected from:
- i) an alcohol-forming coenzyme-A thioester reductase, or an aldehyde-forming CoA thioester reductase plus an alcohol dehydrogenase, to convert intermediates produced by reversal of the β-oxidation cycle to trans Δ2 fatty alcohols, β-keto alcohols, 1,3 diols, or β-hydroxy acids;
- ii) a thioesterase, or an acyl-CoA:acetyl-CoA transferase, or a phosphotransacylase and a carboxylate kinase, to convert intermediates produced by reversal of the β-oxidation cycle to carboxylic acids;
- iii) an aldehyde-forming CoA thioester reductase and an aldehyde decarbonylase, to convert intermediates produced by reversal of the β-oxidation cycle to alkanes or terminal alkenes;
- and
- iv) one or more olefin-forming enzymes to convert intermediates produced by reversal of the β-oxidation cycle to alkenes.
Dependencies are inferred from the claim text.