Heterocyclic compounds and uses thereof
AssigneePlexxikon Inc.
InventorsJiazhong Zhang, John Buell, Katrina Chan, Prabha N. Ibrahim, Jack Lin, Phuongly Pham, Songyuan Shi, Wayne Spevak, Guoxian Wu, Jeffrey Wu
Life of this patent
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Abstract
Heterocyclic compounds of formula (I), methods for their preparation, pharmaceutical compositions containing such a compound and their therapeutic uses.
Claims22
A method for treating a subject suffering from a disease or condition mediated by a bromodomain, said method comprising administering to the subject in need thereof an effective amount of a compound of formula (Va),
- wherein the disease or condition is breast cancer, midline carcinomas, acute myeloid leukemia, chronic lymphocytic leukemia, non-small cell lung cancer, prostate cancer, or uveal melanoma,
- wherein the compound of formula (Va) has the following structure:
- or a pharmaceutically acceptable salt, a solvate, a tautomer, a stereoisomer, or a deuterated analog thereof,
- wherein:
- R2 is H;
- R4 is H;
- R6 is H;
- R7 is H, —OH, C1-6 alkyl, deuterated C1-6 alkyl, aryl, cycloalkyl, or heterocycloalkyl;
- R1 is heteroaryl optionally substituted with from 1-3 Rj groups;
- each R1 is independently halogen, —CN, —OH, —NH2, —NO2, —C(O)OH, —(S)OH, —C(O)NH2, —C(S)NH2, —S(O)2NH2, —NHC(O)NH2, —NHC(S)NH2, —NHS(O)2NH2, —C(NH)NH2, —CH═C(Rk)(Rk), —ORk, —SRk, —OC(O)Rk, —OC(S)Rk, —P(═O)HRk, —P(═O)RkRk, —PH(═O)ORk, —P(═O)(ORk)2, —OP(═O)(ORk)2, —C(O)H, —O(CO)ORk, —C(O)Rk, —C(S)Rk, —C(O)ORk, —C(S)ORk, —S(O)Rk, —S(O)2Rk, —C(O)NHRk, —C(S)NHRk, —C(O)NRkRk, —C(S)NRkRk, —S(O)2NHRk, —S(O)2NRkRk, —C(NH)NHRk, —C(NH)NRkRk, —NHC(O)Rk, —NHC(S)Rk, —NRkC(O)Rk, —NRkC(S)Rk, —NHS(O)2Rk, —NRkS(O)2Rk, —NHC(O)NHRk, —NHC(S)NHRk, —NRkC(O)NH2, —NRkC(S)NH2, —NRkC(O)NHRk, —NRkC(S)NHRk, —NHC(O)NRkRk, —NHC(S)NRkRk, —NRkC(O)NRkRk, —NRkC(S)NRkRk, —NHS(O)2NHRk, —NRkS(O)2NH2, —NRkS(O)2NHRk, —NHS(O)2NRkRk, —NRkS(O)2NRkRk, —NHRk, or —NRkRk;
- each Rk is independently H, C1-6alkyl, aryl, arylalkyl, heteroaryl, heteroarylalkyl, heterocycloalkyl, heterocycloalkylalkyl, cycloalkyl, or cycloalkylalkyl;
- or
- two Rk groups when attached to the same carbon or nitrogen atom are taken together to form a 3- to 6-membered carbocyclic ring or 3- to 8-membered heterocyclic ring having from 1-2 heteroatoms as ring members selected from O, N, and S, wherein the nitrogen or sulfur ring atoms are optionally oxidized;
- R3 is H, halogen, —CN, optionally substituted C1-6alkyl, optionally substituted deuterated C1-6alkyl, optionally substituted aryl, optionally substituted aryl-C1-4alkyl, optionally substituted heteroaryl, optionally substituted heteroaryl-C1-4alkyl, optionally substituted C3-8 cycloalkyl, optionally substituted C3-8 cycloalkyl-C1-4alkyl, optionally substituted heterocycloalkyl, or optionally substituted heterocycloalkyl-C1-4alkyl;
- and
- R5 is
- optionally substituted with from 1 to 2 R11 groups independently selected from D, halogen, C1-6alkyl, deuterated C1-6alkyl, C1-4haloalkyl, C1-4haloalkoxy, and —CN;
- wherein the wavy line indicates the point of attachment to the rest of molecule.
A method for treating a subject suffering from a disease or condition mediated by a bromodomain, said method comprising administering to the subject in need thereof an effective amount of a compound of formula (Va),
- wherein the disease or condition is breast cancer, midline carcinomas, acute myeloid leukemia, chronic lymphocytic leukemia, non-small cell lung cancer, prostate cancer, or uveal melanoma,
- wherein the compound of formula (Va) has the following structure:
- or a pharmaceutically acceptable salt, a solvate, a tautomer, a stereoisomer, or a deuterated analog thereof,
- wherein:
- R2 is H;
- R4 is H;
- R6 is H;
- R7 is H, —OH, C1-6 alkyl, deuterated C1-6 alkyl, aryl, cycloalkyl, or heterocycloalkyl;
- R1 is heteroaryl optionally substituted with from 1-3 Rj groups;
- each Rj is independently halogen, —CN, —OH, —NH2, —NO2, —C(O)OH, —(S)OH, —C(O)NH2, —C(S)NH2, —S(O)2NH2, —NHC(O)NH2, —NHC(S)NH2, —NHS(O)2NH2, —C(NH)NH2, —CH═C(Rk)(Rk), —ORk, —SRk, OC(O)Rk, —OC(S)Rk, —P(=O)HRk, —P(═O)RkRk, —PH(═O)ORk, —P(═O)(ORk)2, —OP(═O)(ORk)2, —C(O)H, —O(CO)ORk, —C(O)Rk, —C(S)Rk, —C(O)ORk,—C(S)ORk, —S(O)Rk, —S(O)2Rk, —C(O)NHRk, —C(S)NHRk, —C(O)NRkRk, —C(S)NRkRk, —S(O)2NHRk, —S(O)2NRkRk, —C(NH)NHRk, —C(NH)NRkRk, —NHC(O)Rk, —NHC(S)Rk, —NRkC(O)Rk, —NRkC(S)Rk, —NHS(O)2Rk, —NRkS(O)2Rk, —NHC(O)NHRk, —NHC(S)NHRk, —NRkC(O)NH2, —NRkC(S)NH2, —NRkC(O)NHRk, —NRkC(S)NHRk, —NHC(O)NRkRk, —NHC(S)NRkRk, —NRkC(O)NRkRk, —NRkC(S)NRkRk, —NHS(O)2NHRk, —NRkS(O)2NH2,—NRkS(O)2NHRk, —NHS(O)2NRkRk, —NRkS(O)2NRkRk, —NHRk,or —NRkRk,
- each Rk is independently H, C1-6alkyl, aryl, arylalkyl, heteroaryl, heteroarylalkyl, heterocycloalkyl, heterocycloalkylalkyl, cycloalkyl, or cycloalkylalkyl;
- or
- two Rk groups when attached to the same carbon or nitrogen atom are taken together to form a 3- to 6-membered carbocyclic ring to 3- or 8-membered heterocyclic ring having from 1-2 heteroatoms as ring members selected from O, N, and S, wherein the nitrogen or sulfur ring atoms are optionally oxidized;
- R3 is deuterated C1-6alkyl, C1-6alkyl, aryl, heteroaryl, C3-8 cycloalkyl, or heterocycloalkyl, wherein each R3 is optionally substituted with from 1-3 substituents independently selected from CN, —OH, —NH2, —NO2, —C(O)OH, —C(S)OH, —C(O)NH2, —C(S)NH2, —S(O)2NH2, —NHC(O)NH2, —NHC(S)NH2, —NHS(O)2NH2, —C(NH)NH2, —B(OH)2, —Si(Rn)3, —CH═C(Rn)(Rn), —ORn, —SRn, —OC(O)Rn, —OC(S)Rn, —P(═O)HRn, —P(═O)RnRn, —PH(═O)ORn, —P(═O)(ORn)2, —OP(═O)(ORn)2, —C(O)H, —O(CO)ORn, —C(O)Rn, —C(S)Rn, —C(O)ORn, —C(S)ORn, —S(O)Rn, —S(O)2Rn, —C(O)NHRn, —C(S)NHRn, —C(O)NRnRn, —C(S)NRnRn, —S(O)2NHRn, —S(O)2NRnRn, —C(NH)NHRn, —C(NH)NRnRn, —NHC(O)Rn, —NHC(S)Rn, —NRnC(O)Rn, —NRnC(S)Rn, —NHS(O)2Rn, —NRnS(O)2Rn, —NHC(O)NHRn, —NHC(S)NHRn, —NRnC(O)NH2, —NRnC(S)NH2, —NRnC(O)NHRn, —NRnC(S)NHRn, —NHC(O)NRnRn, —NHC(S)NRnRn, —NRnC(O)NRnRn, —NRnC(S)NRnRn, —NHS(O)2NHRn, —NRnS(O)2NH2, —NRnS(O)2NHRn, —NHS(O)2NRnRn, —NRnS(O)2NRnRn, —NHRn, Rn, and —NRnRn, wherein each Rn is independently selected from H, C1-6alkyl, aryl, arylalkyl, heteroaryl, heteroarylalkyl, heterocycloalkyl, heterocycloalkylalkyl, cycloalkyl, and cycloalkylalkyl;
- or two Rn groups when attached to the same carbon or nitrogen atom are taken together to form a 3- to 6-membered carbocyclic ring or 3- to 8-membered heterocyclic ring having from 1-2 heteroatoms as ring members selected from O, N, and S, wherein the nitrogen or sulfur ring atoms are optionally oxidized;
- and
- R5 is
- optionally substituted with from 1 to 2 R11 groups independently selected from D, halogen, C1-6alkyl, deuterated C1-6alkyl, C1-4haloalkyl, C1-4, haloalkoxy, and —CN;
- wherein the wavy line indicates the point of attachment to the rest of molecule.
A method for treating a subject suffering from a disease or condition mediated by a bromodomain, said method comprising administering to the subject in need thereof an effective amount of a compound of formula (Va),
- wherein the disease or condition is breast cancer, midline carcinomas, acute myeloid leukemia, chronic lymphocytic leukemia, non-small cell lung cancer, prostate cancer, or uveal melanoma,
- wherein the compound of formula (Va) has the following structure:
- or a pharmaceutically acceptable salt, a solvate, a tautomer, a stereoisomer, or a deuterated analog thereof,
- wherein:
- R2 is H;
- R4 is H;
- R6 is H;
- R7 is H, —OH, C1-6alkyl, deuterated C1-6alkyl, aryl, cycloalkyl, or heterocycloalkyl;
- R1 is heteroaryl optionally substituted with from 1-3 Rj groups;
- each Rj is independently halogen, —CN, —OH, —NH2, —NO2, —C(O)OH, —(S)OH, —C(O)NH2, —C(S)NH2, —S(O)2NH2, —NHC(O)NH2, —NHC(S)NH2, —NHS(O)2NH2, —C(NH)NH2, —CH═C(Rk)(Rk), —ORk, —SRk, OC(O)Rk, —OC(S)Rk, —P(═O)HRk, —P(═O)RkRk, —PH(═O)ORk, —P(═O)(ORk)2, —OP(═O)(ORk)2, —C(O)H, —O(CO)ORk, —C(O)Rk, —C(S)Rk, —C(O)ORk, —C(S)ORk, —S(O)Rk, —S(O)2Rk, —C(O)NHRk, —C(S)NHRk, —C(O)NRkRk, —C(S)NRkRk, —S(O)2NHRk, —S(O)2NRkRk, —C(NH)NHRk, —C(NH)NRkRk, —NHC(O)Rk, —NHC(S)Rk, —NRkC(O)Rk, —NRkC(S)Rk, —NHS(O)2Rk, —NRkS(O)2Rk, —NHC(O)NHRk, —NHC(S)NHRk, —NRkC(O)NH2, —NRkC(S)NH2, —NRkC(O)NHRk, —NRkC(S)NHRk, —NHC(O)NRkRk, —NHC(S)NRkRk, —NRkC(O)NRkRk, —NRkC(S)NRkRk, —NHS(O)2NHRk, —NRkS(O)2NH2, —NRkS(O)2NHRk, —NHS(O)2NRkRk, —NRkS(O)2NRkRk, —NHRk, or —NRkRk;
- each Rk is independently H, C1-6alkyl, aryl, arylalkyl, heteroaryl, heteroarylalkyl, heterocycloalkyl, heterocycloalkylalkyl, cycloalkyl, or cycloalkylalkyl;
- or
- two Rk groups when attached to the same carbon or nitrogen atom are taken together to form a 3- to 6-membered carbocyclic ring or 3- to 8-membered heterocyclic ring having 1-2 heteroatoms as ring members selected from O, N, and S, wherein the nitrogen or sulfur ring atoms are optionally oxidized;
- R3 is aryl or heteroaryl, wherein each R3 is optionally substituted with from 1-3 substituents independently selected from halogen, vinyl, C1-6alkyl, —OH, C1-6alkoxy, C1-6haloalkyl, C1-6haloalkoxy, —CN, —NH2, —NH(C1-6alkyl), —N(C1-6alkyl)2, C3-6cycloalkyl, heterocycloalkyl, aryl, and heteroaryl;
- and
- R5 is
- optionally substituted with from 1 to 2 R11 groups independently selected from D, halogen, C1-6alkyl, deuterated C1-6alkyl, C1-4haloalkyl, C1-4haloalkoxy, and —CN;
- wherein the wavy line indicates the point of attachment to the rest of molecule.
A method for treating a subject suffering from a disease or condition mediated by a bromodomain, said method comprising administering to the subject in need thereof an effective amount of a compound of formula (Va),
- wherein the disease or condition is breast cancer, midline carcinomas, acute myeloid leukemia, chronic lymphocytic leukemia, non-small cell lung cancer, prostate cancer, or uveal melanoma,
- wherein the compound of formula (Va) has the following structure:
- or a pharmaceutically acceptable salt, a solvate, a tautomer, a steroisomer, or a deuterated analog thereof,
- wherein:
- R2 is H;
- R4 is H;
- R6 is H;
- R7 is H, —OH, C1-6alkyl, deuterated C1-6alkyl, aryl, cycloalkyl, or heterocycloalkyl;
- R1 is heteroaryl optionally substituted with from 1-3 Rj groups;
- each Rj is independently halogen, —CN, —OH, —NH2, —NO2, —C(O)OH, —(S)OH, —C(O)NH2, —C(S)NH2, —S(O)2NH2, —NHC(O)NH2, —NHC(S)NH2, —NHS(O)2NH2, —C(NH)NH2, —CH═C(Rk)(Rk), —ORk, —SRk, OC(O)Rk, —OC(S)Rk, —P(═O)HRk, —P(═O)RkRk, —PH(═O)ORk, —P(═O)(ORk)2, —OP(═O)(ORk)2, —C(O)H, —O(CO)ORk, —C(O)Rk, —C(S)Rk, —C(O)ORk, —C(S)ORk, —S(O)Rk, —S(O)2Rk, —C(O)NHRk, —C(S)NHRk, —C(O)NRkRk, —C(S)NRkRk, —S(O)2NHRk, —S(O)2NRkRk, —C(NH)NHRk, —C(NH)NRkRk, —NHC(O)Rk, —NHC(S)Rk, —NRkC(O)Rk, —NRkC(S)Rk, —NHS(O)2Rk, —NRkS(O)2Rk, —NHC(O)NHRk, —NHC(S)NHRk, —NRkC(O)NH2, —NRkC(S)NH2, —NRkC(O)NHRk, —NRkC(S)NHRk, —NHC(O)NRkRk, —NHC(S)NRkRk, —NRkC(O)NRkRk, —NRkC(S)NRkRk, —NHS(O)2NHRk, —NRkS(O)2NH2, —NRkS(O)2NHRk, —NHS(O)2NRkRk, —NRkS(O)2NRkRk, —NHRk, or —NRkRk;
- each Rk is independently H, C1-6alkyl, aryl, arylalkyl, heteroaryl, heteroarylalkyl, heterocycloalkyl, heterocycloalkylalkyl, cycloalkyl, or cycloalkylalkyl;
- or
- two Rk groups when attached to the same carbon or nitrogen atom are taken together to form a 3- to 6-membered carbocyclic ring to 3- to 8-membered heterocyclic ring having from 1-2 heteroatoms as ring members selected from O, N, and S, wherein the nitrogen or sulfur ring atoms are optionally oxidized;
- R3 is aryl or heteroaryl, each of which is optionally substituted with from 1-5 substituents independently selected from halogen, —CN, —OH, —NH2, —NO2, —CH═C(Ri)(Ri), —C(O)OH, —C(S)OH, —C(O)NH2, —C(S)NH2, —S(O)2NH2, —NHC(O)NH2, —NHC(S)NH2, —NHS(O)2NH2, —C(NH)NH2, —ORi, —SRi, —OC(O)Ri, —OC(S)Ri, —P(═O)HRi, —P(═O)RiRi, —PH(═O)ORi, —P(═O)(OR)2, —OP(═O)(ORi)2, —C(O)H, —O(CO)ORi, —C(O)Ri, —C(S)Ri, —C(O)ORi, —C(S)ORi, —S(O)Ri, —S(O)2Ri, —C(O)NHRi, —C(S)NHRi, —C(O)NRiRi, —C(S)NRiRi, —S(O)2NHRi, —S(O)2NRiRi, —C(NH)NHRi, —C(NH)NRiRi, —NHC(O)Ri, —NHC(S)Ri, —NRiC(O)Ri, —NRiC(S)Ri, —NHS(O)2Ri, —NRiS(O)2Ri, —NHC(O)NHRi, —NHC(S)NHRi, —NRiC(O)NH2, —NRiC(S)NH2, —NRiC(O)NHRi, —NRiC(S)NHRi, —NHC(O)NRiRi, —NHC(S)NRiRi, —NRiC(O)NRiRi, —NRiC(S)NRiRi, —NHS(O)2NHRi, —NRiS(O)2NH2, —NRiS(O)2NHRi, —NHS(O)2NRiRi, —NRiS(O)2NRiRi, Ri, —NHRi, and —NRiRi, wherein each Ri is independently C1-6alkyl, aryl, aryl-C1-2alkyl, C3-6cycloalkyl, C3-6cycloalkyl-C1-4alkyl, heteroaryl, heteroaryl-C1-4alkyl, heterocycloalkyl, or heterocycloalkyl-C1-4alkyl, wherein each Ri is further optionally substituted with from 1-3 Rp groups independently selected from halogen, CN, —OH, —NH2, —N(Rq)(Rq), —NO2, —C(O)OH, —C(O)NH2, —S(O)2NH2, —NHC(O)NH2, —C(NH)NH2, —P(═O)HRq, —P(═O)RqRq, —PH(═O)ORq, —P(═O)(ORq)2, —OP(═)(ORq)2, —OC(O)Rq, —OC(S)Rq, —C(O)Rq, —C(S)Rq, —C(O)ORq, —S(O)2Rq, —C(O)NHRq, C1-6alkyl, C1-6alkoxy, halogen, C1-6 haloalkyl, and C1-6 haloalkoxy, and wherein Rq is C1-6alkyl;
- and
- R5 is
- optionally substituted with from 1 to 2 R11 groups independently selected from D, halogen, C1-6alkyl, deuterated C1-6alkyl, C1-4haloalkyl, C1-4haloalkoxy, and —CN;
- wherein the wavy line indicates the point of attachment to the rest of molecule.
A method for treating a subject suffering from a disease or condition mediated by a bromodomain, said method comprising administering to the subject in need thereof an effective amount of a compound, wherein the disease or condition is breast cancer, midline carcinomas, acute myeloid leukemia, chronic lymphocytic leukemia, non-small call lung cancer, prostate cancer, or uveal melenoma, wherein the compound is of formula:
- or a pharmaceutically acceptable salt, a solvate, or a deuterated analog thereof.
Dependencies are inferred from the claim text.