Specific peptide binders to proteins identified via systematic discovery, maturation and extension process
AssigneeRoche Sequencing Solutions, Inc.
InventorsThomas Albert, Ryan Bannen, Victor Lyamichev, Jigar Patel, Eric Sullivan
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Abstract
The invention provides novel peptide binders for streptavidin (SA), Taq polymerase and several human proteins: Prostate Specific Antigen (PSA), thrombin, Tumor Necrosis Factor Alpha (TNFα), and Urokinase-type Plasminogen Activator (uPA).
Claims20
An isolated artificial peptide binder bound to a target protein, the isolated artificial peptide binder having specific affinity for the target protein, the artificial peptide binder having at least 5 and up to 20 amino acids, the artificial peptide binder selected from a streptavidin binder comprising a sequence selected from the sequences in Tables 1 and 2;
- a Taq polymerase binder comprising a sequence selected from the sequences in Table 3;
- a binder to Prostate Specific Antigen (PSA) comprising a sequence selected from the sequences in Table 4;
- a thrombin binder comprising a sequence selected from the sequences in Table 5;
- a binder to Tumor Necrosis Factor comprising a sequence selected from the sequences in Table 6;
- and a binder to Urokinase-type Plasminogen Activator (uPA) comprising a sequence selected from the sequences in Table 7,
- wherein the artificial peptide binder is one of an N-terminal tag added to a protein, a C-terminal tag added to a protein, and attached to a solid support through a covalent bond,
- wherein when the artificial peptide binder is a streptavidin binder, the target protein is streptavidin,
- wherein when the artificial peptide binder is a Taq polymerase binder, the target protein is Taq polymerase,
- wherein when the artificial peptide binder is a Prostate Specific Antigen (PSA) binder, the target protein is Prostate Specific Antigen (PSA),
- wherein when the artificial peptide binder is a thrombin binder, the target protein is thrombin,
- wherein when the artificial peptide binder is a binder to Tumor Necrosis Factor, the target protein is Tumor Necrosis Factor, and
- wherein when the artificial peptide binder is a binder to Urokinase-type Plasminogen Activator (uPA), the target protein is Urokinase-type Plasminogen Activator (uPA).
An isolated artificial peptide binder bound to streptavidin, the isolated artificial peptide binder having specific affinity for streptavidin, the artificial peptide binder having at least 5 and up to 20 amino acids, the artificial peptide binder comprising a sequence selected from LGEYH (SEQ ID NO:1), FDEWL (SEQ ID NO:2), PAWAH (SEQ ID NO:3), DPFGW (SEQ ID NO:4), and RPGWK (SEQ ID NO:5), wherein the artificial peptide binder is one of an N-terminal tag added to a protein, a C-terminal tag added to a protein, and attached to a solid support through a covalent bond.
An isolated artificial peptide binder bound to streptavidin, the isolated artificial peptide binder having specific affinity for streptavidin, the artificial peptide binder having at least 5 and up to 20 amino acids, the artificial peptide binder comprising the sequence AFPDYLAEYHGG (SEQ ID NO:241), wherein the artificial peptide binder is one of an N-terminal tag added to a protein, a C-terminal tag added to a protein, and attached to a solid support through a covalent bond.
Dependencies are inferred from the claim text.